Browse of TCMCG006C50583 protein

CDS

Accession Number	TCMCG006C50583
gbkey	CDS
Protein Id	XP_013731153.1
Location	complement(join(23657..23801,23875..24019,24109..24259,24360..24869,25094..25252,25361..25756,25832..27568))
Gene	LOC106434845
GeneID	106434845
Organism	Brassica napus

Protein

Length	1080aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA293435
db_source	XM_013875699.2
Definition	piezo-type mechanosensitive ion channel homolog [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category	S
Description	Piezo-type mechanosensitive ion channel homolog
KEGG_TC	1.A.75.1
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko02000        [VIEW IN KEGG] ko04131        [VIEW IN KEGG]
KEGG_ko	ko:K22128        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005215        [VIEW IN EMBL-EBI] GO:0005216        [VIEW IN EMBL-EBI] GO:0005261        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0006811        [VIEW IN EMBL-EBI] GO:0006812        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008324        [VIEW IN EMBL-EBI] GO:0008381        [VIEW IN EMBL-EBI] GO:0009581        [VIEW IN EMBL-EBI] GO:0009582        [VIEW IN EMBL-EBI] GO:0009605        [VIEW IN EMBL-EBI] GO:0009612        [VIEW IN EMBL-EBI] GO:0009628        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0015075        [VIEW IN EMBL-EBI] GO:0015267        [VIEW IN EMBL-EBI] GO:0015318        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0022803        [VIEW IN EMBL-EBI] GO:0022836        [VIEW IN EMBL-EBI] GO:0022838        [VIEW IN EMBL-EBI] GO:0022857        [VIEW IN EMBL-EBI] GO:0022890        [VIEW IN EMBL-EBI] GO:0034220        [VIEW IN EMBL-EBI] GO:0042391        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0050982        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051606        [VIEW IN EMBL-EBI] GO:0051716        [VIEW IN EMBL-EBI] GO:0055085        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0065008        [VIEW IN EMBL-EBI] GO:0071214        [VIEW IN EMBL-EBI] GO:0071260        [VIEW IN EMBL-EBI] GO:0071496        [VIEW IN EMBL-EBI] GO:0098655        [VIEW IN EMBL-EBI] GO:0104004        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGAAGTCTGAAATGCTGAACCTGCGGGTACAGCTTCACAAAATGAATTCTGATTCTAATATTGGACTTACTTCTCCGCGCACTGAAGGTCTAAGAAGGAGGAGGAATCCGTTCTTGATTCCAGATAGTGGTGCAGCCAGTCCTGAGATTGATGGAGTAGTCCACAGGAAAGAAGAGCAGCCTATTGTCGAGGATCCACAGTATCCTTTTGAAGCTCAGGAGCTTCCTATCAGTACTACTCCAGAAGCACCAGATTCTCCAGAGTGTTCATTTGGAGCATCTCCTTGTGAGATCACTGAAATTCAACACAATACTGATGTCATGTCTACGGAGCGTGAAATAAAAGATAAGTCAGAAGGAAAAGATAATCCCTTGATTTCTGCTGTGCAACTCATCGGTGATGGTGTTTCCCAGGTGCAATTTATTGGAAATCAGGCAGTAAATAACCTTGCGAATTTCTTAAACATCTCACCAGAAAATTCAGATATAAATGAGCAGTCCTCTGTTGATGATGAGGTGTATGATGAGATGGAAAGCCAGAATAGAATACACAAACCTTTTGAACGGTCAACATCTCTACAGTCTGACAGGAGTAGTGATGGCACTAGCTTTCAGATAGGAAGGATCCTTCGTCATATATGGTCTAGGATGCAGTCCAACAATGACATTGTTTGCTATTGCTGCTTCATTATTGCGTTTCTGTGGAACTTCAGTCTTCTTTCCATGGTCTATCTAGCAGCGCTGTTCCTATACGCCCTCTGCGTTCACACTGGACCTACTCACATCTTCTGGGTCGTCATGCTAATGTACACAGAAATCTATATCCTCCTCCAGTACTTATACCAGATTATAATCCAGCACTGTGGGTTGAGTATTGACGCACCACTTCTTCAAGAACTGGGATTTCCAACGCAAAGAATCAAATCATCTTTTGTTGTCAGCTCGTTGCCTCTCTTCCTTGTTTATATATCCACTCTCATACAGAGTGTTATAACAGTGAAAGATGGTGACTGGGTTCCTTCTGCTGATTTCGCTTCTCGCCGGAATGCCCGTGGGAGCCAGAAGGACCTTACAAGAATTAACTGGAGCCTGAGAGTTTGGGATGTGTACAAGAAGCTGAGAGATGGTGTGAAATTGGTGATCAGAAGCATGTATCGGTACTGGATCTCTCTGACACGTGGAGCAGAATCCCCTCCTTACTTTGTTCAGGTGACAATGGATGTTCACATGTGGCCTGAAGATGGAATTCAACCTGAAAGAGTTGAATGCAGAATGAATCAGTTACTTAGGCTTGTCCATAATGAGAGATGCGAGAAGGGAAACCCTGATCTTTGTCCTTACTCTAGCAGGGTCCACGTACAAAGTATTGAGAGAAGTACAGAGACCCCAAACGAGGCCCTGGTTGTCCTTGAGGTTGAGTATGCTTCTCCCACGAATGGGTGTTGTTCAGCAGAATGGTACAGATCACTTACCCCAGCTTCAGATGTGGCGAAAGAAATTCGCAAAGCTCAACATAGTGGACTTGTTGAAGGAACTGGGTTCCCTTACCCCATCCTCTCTGTGATTGGCGGAGGAAAGAGAGAAACAGACCTCTATGCTTACATATTTGGTGCTGATTTGATGGCCTTCTTTCTGGTTGCTATTTTCTACCAATCAGTCATTAAAAATAAAAGCGAGTTTATCGATGTATATCAGCTAGTGGACCAGTTCCCATTTGACTTTGTCATTATTCTAATGGTTATCTTCTTCCTGATTGTTGTTGATCGGGTCATCTATCTTTGCTCCTTTGCGACTGGAAAAGTGGTGTACTACCTCTTCAGTCTTATTCTCTTCACATATGCGGTGACAGAGTATGCTTGGAGCATATATACGACGCAGCAACACGCTGCTGGCTTGGCTCTCAGATTCATATTTCTTGCCAAAGCAATGTCACTAGCTCTCCAGGCCATACAAATCCGCTATGGACTACCTCATAAGAGCACCCTATACCGGCAGTTTCTGACAAGTGAAGTTTCAAGGATCAATTACTATGGCTACAGACTTTACCGTGCTCTTCCTTTCCTGTATGAACTGAGATGTGTACTTGACTGGTCCTGCACAGCCACATCACTGACAATGTATGACTGGCTCAAGTTGGAAGATGTGAATGCGAGTTTGTACCTTGTCAAATGCGATACAGTTTTAAATCGAGCTACACACAAACATGGGGAGAGGCAAACAAAAATGACTAAATGCTGCAACGGGATATGTCTCTTCTTCATCTTGTTATGCGTTATATGGGCTCCTATGCTGATGTATAGCAGTGGCAACCCAACAAACATTGCCAACCCGATAAAAGATGCGAGCGTTCAAATTGATATAAAAACAATTGGTGGAAAGCTTACTTTGTTCCAGACAACTCTGTGCAAAAGAATCTCAGGGGATGACATTGATCTTGGGCTAGATCTAGGGTCCCAAAGCTTCTTGCCAACGTACAACAAAAATGACATTCAGCTGATATGCTGCCAAGCTGATGCAAGCGTTCTATGGCTTGTCCCTGACACAGTTGTGACCAGATTCGTTCAATCCCTGGACTGGGACACGGAAATGGACATCACCTTTTCTTGGGTTCTAAACAGAGACCGACCCAAAGGCAAGGAGACTGTCAAGTATGAAAGAAGTGTGGACCCTCAGGACCTTCCGAAACGCTCTGATGTGCAAATGGTCCTCAATGGCTCAATGGATGGATTTAGAGTGCAGAACTTATACCCAAAGTTTTTCCGTGTTACTGGCTCTGGTGATGTCAGGTCTTTTGAGGATCAGACAGATGAAGTGAGTGCAGACATACTCATGAACCATGCAGATTCCAAGTGGTGGTGGTCATTCCATAATCTTAAAGCGTCCGAAAATATCAGCGCTTGCGAGGGTATGGATGGACCAGTTGCTATCATAATGTCCGAGGAAACACCTCCACAGGGGTTTCTTGGTGACACGCTCAGCAAATTCAGTATATGGGGGCTCTATATAACATTTGTACTGGCAGTGGGGCGTTTTATCAGGCTCCAATGCTCTGACCTGCGTATGAGAATACCTTACGAGAACCTGCCTTCGTGTGACAGATTAATAGCAATATGTGAGGACTTATACGCGGCGAGAGCGGAGGGTGAGCTTGGAGTAGAAGAAGTTCTATACTGGACCCTTGTGAAGATCTATAGATCCCCACACATGCTGCTTGAGTATACAAAGCTAGACTATGATGCTTAG

Protein:   MKSEMLNLRVQLHKMNSDSNIGLTSPRTEGLRRRRNPFLIPDSGAASPEIDGVVHRKEEQPIVEDPQYPFEAQELPISTTPEAPDSPECSFGASPCEITEIQHNTDVMSTEREIKDKSEGKDNPLISAVQLIGDGVSQVQFIGNQAVNNLANFLNISPENSDINEQSSVDDEVYDEMESQNRIHKPFERSTSLQSDRSSDGTSFQIGRILRHIWSRMQSNNDIVCYCCFIIAFLWNFSLLSMVYLAALFLYALCVHTGPTHIFWVVMLMYTEIYILLQYLYQIIIQHCGLSIDAPLLQELGFPTQRIKSSFVVSSLPLFLVYISTLIQSVITVKDGDWVPSADFASRRNARGSQKDLTRINWSLRVWDVYKKLRDGVKLVIRSMYRYWISLTRGAESPPYFVQVTMDVHMWPEDGIQPERVECRMNQLLRLVHNERCEKGNPDLCPYSSRVHVQSIERSTETPNEALVVLEVEYASPTNGCCSAEWYRSLTPASDVAKEIRKAQHSGLVEGTGFPYPILSVIGGGKRETDLYAYIFGADLMAFFLVAIFYQSVIKNKSEFIDVYQLVDQFPFDFVIILMVIFFLIVVDRVIYLCSFATGKVVYYLFSLILFTYAVTEYAWSIYTTQQHAAGLALRFIFLAKAMSLALQAIQIRYGLPHKSTLYRQFLTSEVSRINYYGYRLYRALPFLYELRCVLDWSCTATSLTMYDWLKLEDVNASLYLVKCDTVLNRATHKHGERQTKMTKCCNGICLFFILLCVIWAPMLMYSSGNPTNIANPIKDASVQIDIKTIGGKLTLFQTTLCKRISGDDIDLGLDLGSQSFLPTYNKNDIQLICCQADASVLWLVPDTVVTRFVQSLDWDTEMDITFSWVLNRDRPKGKETVKYERSVDPQDLPKRSDVQMVLNGSMDGFRVQNLYPKFFRVTGSGDVRSFEDQTDEVSADILMNHADSKWWWSFHNLKASENISACEGMDGPVAIIMSEETPPQGFLGDTLSKFSIWGLYITFVLAVGRFIRLQCSDLRMRIPYENLPSCDRLIAICEDLYAARAEGELGVEEVLYWTLVKIYRSPHMLLEYTKLDYDA